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Citation: Hoffmann A, Penner J, Vohland K, Cramer W, Doubleday R, Henle K, Kõljalg U, Kühn I, Kunin WE, Negro JJ, Penev L, Rodríguez C, Saarenmaa H, Schmeller DS, Stoev P, Sutherland WJ, Tuama1 EO, Wetzel F, Häuser CL (2014) Improved access to integrated biodiversity data for science, practice, and policy - the European Biodiversity Observation Network (EU BON). Nature Conservation 6: 49–65. doi: 10.3897/natureconservation.6.6498
Biodiversity is threatened on a global scale and the losses are ongoing. In order to stop further losses and maintain important ecosystem services, programmes have been put into place to reduce and ideally halt these processes. A whole suite of different approaches is needed to meet these goals. One major scientific contribution is to collate, integrate and analyse the large amounts of fragmented and diverse biodiversity data to determine the current status and trends of biodiversity in order to inform the relevant decision makers. To contribute towards the achievement of these challenging tasks, the project EU BON was developed. The project is focusing mainly on the European continent but contributes at the same time to a much wider global initiative, the Group on Earth Observations Biodiversity Observation Network (GEO BON), which itself is a part of the Group of Earth Observation System of Systems (GEOSS). EU BON will build on existing infrastructures such as GBIF, LifeWatch and national biodiversity data centres in Europe and will integrate relevant biodiversity data from on-ground observations to remote sensing information, covering terrestrial, freshwater and marine habitats.
A key feature of EU BON will be the delivery of relevant, fully integrated data to multiple and different stakeholders and end users ranging from local to global levels. Through development and application of new standards and protocols, EU BON will enable greater interoperability of different data layers and systems, provide access to improved analytical tools and services, and will provide better harmonised biodiversity recording and monitoring schemes from citizen science efforts to long-term research programs to mainstream future data collecting. Furthermore EU BON will support biodiversity science-policy interfaces, facilitate political decisions for sound environmental management, and help to conserve biodiversity for human well-being at different levels, ranging from communal park management to the Intergovernmental Platform on Biodiversity and Ecosystem Services (IPBES). Additionally, the project will strengthen European capacities and infrastructures for environmental information management and sustainable development. The following paper outlines the framework and the approach that are pursued.
Biodiversity information, biodiversity observation/recording, monitoring, data interoperability, data management, biodiversity portal, earth observation, informatics infrastructure, bio-repository, GEOSS, GEO BON, science policy, dissemination
The world’s biodiversity is in a dramatic decline and in its speed is unprecedented. However, the target to “achieve by 2010 a significant reduction of the current rate of biodiversity loss at the global, regional and national level as a contribution to poverty alleviation and to the benefit of all life on Earth”, formulated in the “2010 biodiversity targets” at different Conferences of Parties (COPs) of the Convention on Biodiversity (CBD), has not been met (
All five strategic goals and the underlying twenty targets are important. The development of EU BON is directly linked to the target that states “By 2020, knowledge, the science base and technologies relating to biodiversity, its values, functioning, status and trends, and the consequences of its loss, are improved, widely shared and transferred, and applied.” (target 19 under strategic goal E; see http://www.cbd.int/sp/targets/). While a large quantity of biodiversity data have already been gathered, access to it remains difficult as it is often distributed in fragmented and heterogeneous datasets. Data are scattered across countries and continents with many differences due to countries’ specific traditions and societal frameworks (
This Aichi target was motivated by the growing demand to provide readily accessible data that can be integrated and analysed to support political decisions (cf.
The main aims of EU BON are to follow up the requirements set by GEO BON, while building on the groundwork set by the above mentioned projects, mainly following the footsteps of EBONE (see http://www.wageningenur.nl/ebone ). To achieve this aim, a large collaborative network has been assembled with contributions from 30 institutions including research institutes, small companies (SMEs) and NGOs from 15 European countries, Israel, Brazil and the Philippines (see Figure 1), with the intention to subsequently involve additional associated partners around the world. The 4.5 year EU BON project period, which commenced in December 2012, is supported by the European Commission under the Seventh Framework Programme (FP7). Further details and updates can be found on the project’s website at http://www.eubon.eu .
Additionally, the question arises how the above mentioned data and results are best presented to science, policy and the broader society (see discussion “Connecting policy, models and data” later in the paper. A more detailed discussion and results from a first workshop are presented separately (
Geographic representation of the countries, where black dots on the map indicate the location of the EU BON partners (see http://www.eubon.eu for more details).
Networking for biodiversity science and conservation policy can occur at two main levels that need integration: (1) a science-based social network, comprising and linking the communities of practice engaged in collecting, managing, analysing, and using biodiversity data, and (2) a physical network of interoperating IT infrastructures and systems that store and distribute information of all kinds held by multiple organisations and partners, providing a platform for data analysis and interpretation. For resource efficiency, the establishment of EU BON is built on existing infrastructures and efforts to integrate monitoring schemes and their data across Europe and internationally, in particular the Global Biodiversity Information Facility (GBIF). In supporting GEO BON, EU BON has the following specific objectives:
• Advance the technological and informatics infrastructures in close collaboration with GEO BON, by moving existing biodiversity networks towards standards-based, service-oriented approaches, enabling full interoperability through the “GEOSS Common Infrastructure”.
• Increase data mobilisation and data publishing via scientific communities, citizen scientists and potential data users.
• Enhance our knowledge of biodiversity, biological resources, related habitat and environmental characteristics (e.g. measured via remote sensing), for Europe, and beyond, by integrating, harmonising and mainstreaming data and identifying current knowledge gaps.
• Improve the range and quality of methods and tools for assessment and analysis, as well as visualisation of biodiversity and ecosystem information, focussing particularly on predictive modelling, identification of drivers of change, biodiversity indicators, and supporting priority setting.
• Provide mechanisms for delivering integrated biodiversity information to EU member states, other governments, and sectoral stakeholders to support their reporting obligations under the CBD, the Nature Directives as well as other international conventions and mechanisms.
• Develop frameworks and strategies for future generations, management, and use of integrated biodiversity information at national and regional levels (towards full implementation of the GEO BON plan); this supports the science policy interface, in particular, for IPBES (Intergovernmental Platform on Biodiversity and Ecosystem Services) and existing national reporting obligations to European policies and international conventions.
• Design concepts to sustain future integrated environmental information systems, including active participation by citizen science as well as business and industry, thereby strengthening European capacities and infrastructures.
In addressing these objectives, EU BON directly engages with researchers, policy and other relevant stakeholders as end users of integrated biodiversity information. EU BON’s main deliverables will be made available via a comprehensive “European Biodiversity Portal” designed to satisfy the data and information requirements of the different stakeholder communities, as well as through strategies allowing for a global implementation of GEO BON.
The work programme of EU BON has been developed to advance social as well as scientific networks, and to provide at each step valuable products which serve the broader community. In a first step, a gap analysis on available data sources is being performed and strong efforts are being directed at mobilising fragmented or hidden but valuable biodiversity data. The interoperability between the different resources is being enhanced, and tools for interpretation, modelling and visualisation developed and applied at the global scale to identify the main drivers. A key for transformation of this concept into practical applications are the EU BON testing sites which provide additional scientific information and serve as a reality check for the EU BON tools. Last but not least, the progress and development direction of the project is being continually discussed with different stakeholder groups addressing different scales, in order to play a fundamental role in GEO BON and IPBES. The EU BON work programme has been structured along the nine themes (see Figure 2).
Structure and work flow within the EU BON project.
Biodiversity data are demanding to gather, manage, and analyse because: i) they include many different types of data; ii) the amount of data is large; iii) relevant data sources are still largely fragmented and coverage is often incomplete. Relevant data types include remote sensing data and products such as land cover, habitat information as well as land use intensity, water quality estimates and climate proxies (cf. BIO_SOS project, www.biosos.eu ); taxonomic backbone data including nomenclatural information; genetic sequences and genomics data; observation and monitoring data or specific organisms or taxa; ecological data; data from bio-repositories, and species profile data (e.g. functional traits, conservation status, distribution, abundance data, invasiveness). The amount of biodiversity data is rapidly expanding not only with innovations in genome sequencing technologies but also with new tools for efficient field recording becoming available (
The structural complexity of biodiversity data and the collection process itself are some of the reasons why important data sources are still fragmented and nearly every data type and every monitoring organisation has developed its own information system. EU BON will assess and generate a gap analysis of different data types and make recommendations as well as working examples for future integrated biodiversity mobilisation policies. The project will provide solutions for the storing and managing of selected biodiversity data types such as taxonomic backbone data, data generated by bio-repositories, species profile data, and citizen-science based data.
EU BON will develop recommendations for data integration and interoperability. Starting from the previous work done on-ground by GEO BON (
One important barrier to global biodiversity assessment is the shortage of appropriate analytical tools, and poor accessibility for non-specialist users of those tools that have been developed. Tools and methods for analysing biodiversity monitoring data will be improved and an interface developed to assure the best possible presentation of biodiversity data. EU BON will implement new and existing tools and methods in accessible software packages to make them more widely available to non-specialist users. Remote sensing data provide an important source of habitat information that may improve biodiversity assessment and modelling, yet such data are typically used in isolation, allowing only very coarse categorisation. The EU BON project will help to develop and promulgate recent advancements in interpretation and classification methods (e.g. machine learning and random forest algorithms, multi-scale methods; cf.
A key prerequisite for sustainable management and conservation of biodiversity is a good understanding of how natural and anthropogenic drivers determine spatial and temporal trends of biodiversity. Drivers as well as biodiversity patterns and trends strongly depend on the scale of the analysis even for the same dataset (e.g.
The outcomes of traditional species distribution models yield substantial uncertainty originating from various ecological processes and ignorance of the diversity of life-history patterns. In EU BON, we aim at implementing methods to quantify uncertainties propagated as a result of using different sources and modules of models. An important recent advance is the development of dynamic simulation modelling approaches explicitly including ecological processes (e.g.
The data integration and analytical work undertaken in EU BON are applied to real, on ground situations, as it is important to validate the new tools and the results gained and apply to actual, smaller-scale levels. So far, three European test sites for the envisioned results are part of EU BON: Doñana Biological Reserve (Spain), LTER Rhine-Main Observatory (Germany) and Amvrakikos Wetlands National Park (Greece). Planned additional sites are the Mercantour National Park (France) and those managed by the Sierra Nevada Observatory (Spain), the Israel National Ecosystem Assessment Program (Israel) and the Fundaçao Amazonica de Defesa da Biosfera/Instituto Nacional de Pesquisas da Amazonia (Brazil). These sites also provide direct links to the wide range of stakeholders involved in, and using biodiversity information, such as agriculture, forestry, and tourism. Based on the experiences with the test sites, a strategy for long-term monitoring and observatory data harmonisation will be developed including a business plan for obtaining and managing the necessary financial and other resources.
As a Biodiversity Observation Network (BON) needs to inform policy, a successful development will need to understand the expectations and needs of policymakers. Therefore, four work packages of the project engage in science policy dialogue (mainly IPBES), the implementation of EU BON in the global biodiversity observation network (GEO BON), general outreach and the dissemination of results, and the management of the project including its linking to other EU initiatives and projects, such as LifeWatch.
Currently, for biodiversity there is typically a mismatch between the knowledge requirements of policy makers and the information available to them (
Identifying the use of research and policy issues and their attempted resolution will show what has been effective in the past. The information needs of the policy makers require to be identified and connected to the required monitoring activities (see
As EU BON is intended to be a major contribution to GEO BON, it is necessary to closely link the EU BON work with the GEO BON agenda and also to provide an outlook and refine the GEO BON goals, especially at the policy science interface. Within EU BON we will formulate recommendations for all aspects covered in EU BON on national, regional and global levels with a special focus on monitoring schemes and biodiversity information structures. Outputs of EU BON are also expected to contribute to the work of IPBES, on reducing or even halting the global loss of biodiversity through provision of sound information on the current status as well as future trends of biodiversity. IPBES was established following a gap analysis of the Environmental Programme of the United Nations (UNEP) (
The goals and objectives of EU BON are ambitious and can only be achieved with outstanding engagement in both dissemination and outreach. Project partners are expected to put considerable efforts into communicating the outcomes of their scientific work. As funding comes from EU taxpayers, letting the public know how this money is spent is an obvious obligation of every FP7 project (
Furthermore, we will work on a comprehensive data publishing, citation and usage strategy, including IPR and license issues. Special efforts will also be put into a novel peer review strategy for publishing research data. As a basic dissemination principle, EU BON has adopted open access and multi-targeted popularisation of outputs, to comply with the decision of the Council of Europe recognising “the strategic importance for Europe’s scientific development of open access to scientific information” and the European Commission’s communication and recommendation to the member states that they should aim at improving the access to scientific information produced in Europe. “The open access to scientific research data enhances data quality, reduces the need for duplication of research, speeds up scientific progress and helps to combat scientific fraud.” (
The core output will be the development of a fully integrated data publishing and dissemination toolbox helping data providers to find the best way to publish differently structured biodiversity data. It will also integrate workflows between data journals and the leading aggregators and repositories, such as GEO BON, the Biodiversity Information System for Europe (BISE) run by the the European Environment Agency (EEA), GBIF, Scratchpads, the International Nucleotide Sequence Databases Consortium (GenBank, ENA, DDBJ) and others.
The main impact from EU BON will be through increased interoperability and mobilisation of data and systems through adoption of new standards and technologies, towards the development of strategies for future harmonisation and mainstreaming of biodiversity recording and monitoring, and strengthened European capacities and infrastructures by providing a comprehensive “European Biodiversity Portal” for all stakeholder communities. In addition, public awareness of biodiversity, one of the prominent targets of the CBD Strategic Plan for Biodiversity 2011–2020, as well as of many national biodiversity plans, will be increased. The implementation and further enhancement of analytical methods and visualisation and interpretation tools will provide completely new insights on biodiversity and will strengthen the usefulness of the available information which then can be used for sound political decisions to help safeguard biodiversity in the future. In this way, GEO BON will emerge as the integrating network of networks, as foreseen in the GEO BON Concept Document (http://www.earthobservations.org/geobon.shtml ). There will be increased intention to see that various networks and projects pursue the same aim and to share and use biodiversity data freely across borders and regions.
Recently, GEO BON set the goal to achieve an operational system by 2015, the year when GEOSS’s 10-year implementation plan comes to an end. The Essential Biodiversity Variables (EBV) as proposed by GEO BON (
EU BON will be implementing the GEO BON vision of automated, streamlined data flow, end-to-end, from observations to Essential Biodiversity Variables (EBV), using a plug-and-play service-oriented approach, coordinated through the GEO BON registry system and linked to the GEOSS Common Infrastructure, and transparent to users through portals.
In conclusion, EU BON will use its potential to change the interrelation between citizens, science and policy for biodiversity. Decision makers at different levels will be able to make use of biodiversity information adapted to their specific requirements. Disparate and unconnected databases will be integrated to allow monitoring and evaluation of measures at different spatial and temporal scales. This requires strong efforts not only in regard to technical harmonisation between databases, models and visualisation tools, but also in the dialogue with the associated social networks, spanning a variety of scientific as well as civil science organisations.
The EU BON project is funded by the European Commission (EC) under the 7th Framework Programme (contract no. 308454). This publication reflects the views of the authors, and the EC cannot be held responsible for any use which may be made of the information contained therein. The authors gratefully further acknowledge the support from their respective institutions, and many individual colleagues involved in the project and its preparations.