Research Article |
Corresponding author: Sara M. Santos ( smsantos@uevora.pt ) Academic editor: Cristian-Remus Papp
© 2022 Nelson Fernandes, Eduardo M. Ferreira, Ricardo Pita, António Mira, Sara M. Santos.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Fernandes N, Ferreira EM, Pita R, Mira A, Santos SM (2022) The effect of habitat reduction by roads on space use and movement patterns of an endangered species, the Cabrera vole Microtus cabrerae. In: Santos S, Grilo C, Shilling F, Bhardwaj M, Papp CR (Eds) Linear Infrastructure Networks with Ecological Solutions. Nature Conservation 47: 177-196. https://doi.org/10.3897/natureconservation.47.71864
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Roads are among the most widespread signs of man’s presence around the globe. From simple low traffic trails to wide and highly used highways, roads have a wide array of effects on wildlife. In the present study, we tested how habitat reduction by roads may affect the space use and movement patterns of the Cabrera vole (Microtus cabrerae), a near-threatened Iberian endemism, often living on road verges. A total of 16 voles were successfully radio-tracked in two habitat patches with different size and proximity to roads. Results showed that individuals from the smaller patch (Verge patch) had smaller and less complex home-ranges than those from the larger patch (Meadow patch). Movement patterns were significantly influenced by the day period but only in individuals from the Verge patch. There was evidence of a barrier effect in both habitat patches, being this effect much more noticeable in the verge population. Overall, this study shows that space use and movement patterns of Cabrera voles near roads may be affected by the degree of habitat reduction imposed by these infrastructures. This suggests that species space use and movement patterns at fine-scale should be accounted for in road planning, even for species that may benefit from road verge habitats as refuges.
Barrier effect, Cabrera vole, fragmentation, road ecology, small mammals
Roads are a widespread sign of human presence across the globe, imposing several contrasting effects on wildlife species, from positive to negative (
The negative effects of roads are however more frequent than positive effects, being mainly related to direct mortality, habitat fragmentation, disturbance, and chemical pollution (
Although the negative effects of roads on wildlife are well-documented for many species (
The Cabrera vole (Microtus cabrerae Thomas, 1906) is an Iberian endemism with a patchy distribution across all its range. It is considered “Vulnerable” both in Portugal (
In the present study we evaluated how living in road verges influences space use and movement patterns of Cabrera volesin southern Portugal. Specifically, we assessed whether space use of Cabrera voles may change when occupying road verge patches that are spatially limited and linearly shaped, with individuals exhibiting less complex home range boundaries (
Overall, we expect our study will contribute for a better understanding of the behavioral consequences of roads to small mammals, which should be critical for species management planning and road impacts mitigation.
The present study took place in Alentejo, southern Portugal (38°41'42"N, 08°04'46"W; Figure
We used radio-telemetry data from individuals captured in two habitat patches with different size and road proximity (Meadow and Verge; Figure
The Meadow patch (38°41'30.76"N, 08°05'14.33"W) is a large patch (24 589 m2) with high habitat availability for the species. Dominant vegetation here is sedge/rush and tall perennial grass communities with isolated cork trees in the periphery. The Meadow patch is also crossed by a very small stream, only flooding after abundant rainfall. This area is separated from the road by a fence and a fire break. This patch is flanked by N4 road at North side and by a smaller dead-end road at the West side, with very low traffic. Vole presence signs suggested high local population abundance and were all located outside the road verge habitat (SM Santos, pers. observ.).
The Verge patch (38°41'54.94"N, 08°04'14.26"W) is a small patch (2 021 m2) spatially constrained between two paved roads, N4 at North, and a smaller and less used road at South providing access to private property. The dominant vegetation in this patch is mainly annual grass communities with isolated shrubs (Cytisus spp., Genista spp.), typical of road verge communities (
Both patches are bordered by the same road, but the habitat is much more reduced at the Verge patch when compared to Meadow patch. While the centroid of Verge patch is 14 m from the nearest road, the centroid of the Meadow patch is 60 m away. Therefore, the road effects are expected to be much more evident in the Verge patch. Given the mean home ranges of 300–400 m2 for Cabrera voles in Mediterranean areas (
Voles were captured with Sherman live traps (7×23×9 cm) laid in clusters where the species signs were more concentrated and fresher. Apple and carrot were used as bait, and hydrophobic cotton and grass were provided as bedding (
All Cabrera voles captured were weighed and sex determined in the field to immediately exclude animals with low weight, and pregnant or lactating females, to avoid any negative impacts on local populations. Voles with conditions to be radio-collared (good physical condition and body weight > 36g) were sedated with a subcutaneous injection of Dormitor (0.5 mg/kg) combined with Clorketam (40 mg/kg) to reduce handling stress during collar fitting, following all animal welfare conditions for animals used in research. During sedation, the reproductive status was confirmed based on the presence of descendent testes or perforated vulva and nipple development. Radio transmitters (SOM-2018; Wildlife Materials, Inc., Murphysboro, IL, USA) were attached with collars to voles. The transmitters weighed 2.0 g and represented an average 4.2% (range: 3.1–5.3%) of voles’ body mass (range: 38 – 65 g) in order to ensure that additional energetic costs were kept to a minimum (
Eighteen voles were fitted with collar radio-transmitters: 9 voles in Meadow patch (7 females; 2 males) and 9 in Verge patch (4 females; 5 males). All voles tracked were non-juveniles (> 28g), as recommended elsewhere (
From 7th April to 14th June 2017 the collared voles were tracked on foot using the “homing-in” method (
Due to the short battery life, it was decided to use a clustered sampling scheme, with discontinuous tracking at 15 min intervals, to access space use and movement patterns (
Whenever possible, tracking was carried out until at least a minimum of two session replicates were reached for each individual (excepting the nocturnal session), corresponding to 176 location fixes. At the end of field work a new trapping session took place to remove the collars from tracked animals, though this was only possible for a few of them (n = 4) due to the low recapture rates.
To assess differences in animals’ space use between habitat patches, the individual home ranges, shape complexity index, extension and number of core areas, and the female spatial overlap were estimated. Movement patterns were assessed through path length and linearity, and road crossing rates.
Individual home ranges were estimated using biased random bridge kernel (BRBK) at 95% (where animals spend 95% of their time) and 50% utilization distribution contour (core areas). The BRBK estimator is based on the biased random walk model and deals with serial autocorrelation of the fixes (
The shape complexity index (C) was calculated for each animal to infer differences in resource use between patches as C = L /(2*√(Aπ)), where L is the UD contour perimeter length (m) and A is the area (m2) of contour UD. A perfectly circular contour has C = 1 (
Differences in the degree of spatial interactions were examined calculating home range overlap between females for 95% BRBK (
To assess differences in movement patterns between individuals from the two habitat patches, two responses were calculated from radio-telemetry data: path length and path linearity index.
In the present study, a step is assumed as the movement measured in 15 min, and the path is the group of 16 steps measured during a period of 4 h (15 min × 16). Before these calculations, telemetry data was converted into a time-regular trajectory data from which standard parameters were extracted for each telemetry session: step length, step absolute angle and step relative angle (i.e., turning angle) (
The path length expresses how active an individual was in each session, and it allows to monitor the periods of activity and behavioural patterns (e.g. nocturnal species will have higher path lengths during the night) (
The linearity index was calculated for each observed path as the net displacement distance (the Euclidean distance between the start and the final point of a path), divided by the total length of the path (
In the present study it was assumed that all movements were routine daily movements as the individuals were adults and never abandoned their home range.
For each individual the sex and patch where the tracking took place were registered. For each position fix recorded in the field, we also registered the time at which the fix was taken, together with several variables describing microhabitat composition and structure (Suppl. material
A total of 23 explanatory variables were initially considered for movement pattern analyses: 9 in the step dataset and 17 in the path dataset. The explanatory variables of path dataset are a summary (sum, average, median or mode) of steps variables comprising each path (Suppl. material
All defined response variables were screened for their distribution and the need of transformations. Path length, BRBK (95% and 50%), and Number of core areas were log transformed. For the movement pattern analyses, the paths and steps with zero length were discarded.
The area of individual home ranges (95% BRBK), core areas (50%BRBK), the number of core areas (No BRBK50), the shape complexity index, and female overlap index (UDOI) were compared between the two habitat patches with a Wilcoxon rank-sum test (W) to assess differences between patches in space use parameters (
To assess the influence of explanatory variables (including the habitat patch and day period) in movement patterns, Linear Mixed Models (LMM) were applied to path length and path linearity index (
Before model building, the collinearity among explanatory variables was verified. Thus, for variable pairs showing high collinearity (Pearson correlation: r > 0.7), only the one with strongest correlation with response variables was retained for further analysis. To reduce the number of competing candidate models and avoid spurious effects, each non-collinear explanatory variable was individually tested against the response variable with a Generalised Linear Model (GLM) and this model AIC compared with the respective Null model (a GLM with only the intercept). Explanatory variables that produced models with an AIC higher than the Null model were not considered in mixed models.
Mixed models showing an AIC within two units of the best model (ΔAIC < 2) were considered to be equally supported by the data (
To assess road barrier effect, the number of observed road crossings was compared to the expected number of road crossings through Pearson chi-square test. The expected number of road crossings was generated with correlated random walk (CRW) models (
Analyses were performed in QGIS (2.18 Las Palmas) software and R environment, version 3.4.4 (
A total of 16 voles were successfully tracked. Radio-telemetry provided 3886 position fixes collected over 904h for 16 animals. Mean ± SE fixes per animal was 217.8 ± 48.3. Three batteries failed before the end of the study, one vole was predated by a snake, and another possibly removed the collar. The animals included in analyses have at least a full 24-h period sampled (16 voles). The maximum number of voles tracked simultaneously was four.
Cabrera voles showed home ranges (95% BRBK) between 175 and 815 m2 (mean ± SD: 352 ± 163m2). Core areas (50% BRBK) varied between 37 and 175 m2 (mean ± SD: 62 ± 34 m2).
Steps and paths of zero length were calculated as 73.1% and 14.3% of observations respectively, and were not included in the analyses of movement patterns. Thus, steps length (movement within 15 min) varied between 3 and 28 m (mean ± SD: 5.8 ± 3.5 m), while path length (movement within 4h) varied between 3 and 94.8 m (mean ± SD: 27.4 ± 21.3 m).
Voles from the Verge patch showed significantly (P-value < 0.05) smaller home ranges (95%BRBK) and lower shape complexity index (sh_complex) when compared with voles from the Meadow patch (Figure
Home range (BRB Kernel 95%) of each radio-tracked Cabrera vole in southern Portugal; Panel A meadow patch; Panel B verge patch. Females are represented with continuous home range outline, while males are represented with discontinuous home range outline.
Summary results of Wilcoxon rank tests applied to the space use parameters of Cabrera voles with observed values for the two habitat patches (mean ± SD), also showing the value of the test statistic (W) and the p-value for the test (P-value); 95%BRBK: biased random bridge kernel (BRBK) at 95% utilization distribution contour; 50%BRBK: biased random bridge kernel (BRBK) at 50% (core areas); No BRBK50: number of core areas; sh_complex: shape complexity index; UDOI: utilization distribution overlap index.
Meadow | Verge | W | P-value | |
---|---|---|---|---|
95%BRBK a | 450.5 ± 178.4 (m2) | 254.8 ± 60.6 (m2) | 56 | 0.01 |
50%BRBK a | 71.2 ± 45.7 (m2) | 52.2 ± 12.2 (m2) | 39 | 0.505 |
No BRBK50 a | 2.1 ± 2.0 | 1.6 ± 0.9 | 34.5 | 0.815 |
sh_complex | 1.7 ± 0.4 | 1.1 ± 0.1 | 61 | 0.001 |
UDOI b | 0.013 ± 0.033 | 0.000011 ± 0.000017 | 152 | 0.375 |
The length of movement paths was explained by a group of five models (ΔAICc < 2), the first model had a weight of 0.37 and an AIC improvement relatively to the Null model of 38. (Null model AIC = 422; best model AIC = 384).
According to the average model, there were differences in path length between day periods, according to the patch type: paths were longer for the 5–9h period (dawn) when compared with the three following periods (9–13h, 13–17h, 17–21h) in Verge patch (but not in Meadow patch). This interaction effect is more noticeable between the periods 5–9h (dawn) and 17–21h (sunset; Figure
None of the path linearity models had a fit superior to the Null model (AIC = 56.4).
There were no crossing events recorded for any of the radio-tracked voles. The overall expected road crossing percentage in the Meadow patch was 10.2% (Pearson chi-square = 12.25; p-value = 0.0005) while the expected value for the Verge patch was 54.2% (Pearson chi-square = 101.79; p-value = 0.0000; Table
When analyzing crossing events for individual animals, all voles presented road crossing rates lower than expected, although the differences were not statistically significant for most voles from the Meadow patch (Table
Comparison between the observed and the expected paths through a Pearson chi-square test by patch; for each comparison is also presented the crossing estimate, Chi-square and P-Value.
Positive Observed crossings | Negative Observed crossings | Positive Expected crossings | Negative Expected crossings | Estimate | Chi-square | P-Value | |
---|---|---|---|---|---|---|---|
Meadow | 0 | 108 | 1190 | 10485 | 0.102 | 12.245 | <0.001 |
Verge | 0 | 83 | 5640 | 4485 | 0.542 | 101.79 | <0.001 |
Comparison between the observed and the expected paths through a Pearson chi-square test by individual with the crossing estimate, Chi-square and P-Value.
Patch | Animal | Positive Observed crossings | Negative Observed crossings | Positive Expected crossings | Negative Expected crossings | Estimate | Chi-square | P-Value |
---|---|---|---|---|---|---|---|---|
Meadow | A | 0 | 18 | 254 | 1641 | 0.134 | 2.782 | 0.095 |
B | 0 | 16 | 275 | 1370 | 0.167 | 3.205 | 0.073 | |
C | 0 | 17 | 1 | 1644 | 0.000 | 0.010 | 0.919 | |
D | 0 | 7 | 147 | 853 | 0.147 | 1.205 | 0.272 | |
E | 0 | 14 | 400 | 1245 | 0.243 | 4.486 | 0.034 | |
F | 0 | 14 | 49 | 1451 | 0.033 | 0.473 | 0.492 | |
G | 0 | 13 | 51 | 1194 | 0.041 | 0.555 | 0.456 | |
H | 0 | 9 | 13 | 1087 | 0.012 | 0.108 | 0.743 | |
Verge | J | 0 | 12 | 833 | 912 | 0.477 | 10.893 | 0.001 |
L | 0 | 12 | 849 | 596 | 0.587 | 16.896 | <0.001 | |
M | 0 | 14 | 980 | 520 | 0.653 | 25.933 | <0.001 | |
N | 0 | 9 | 471 | 774 | 0.378 | 5.453 | 0.02 | |
O | 0 | 11 | 626 | 474 | 0.569 | 14.340 | <0.001 | |
Q | 0 | 7 | 345 | 500 | 0.408 | 4.803 | 0.028 | |
R | 0 | 9 | 843 | 257 | 0.766 | 28.756 | <0.001 | |
S | 0 | 9 | 693 | 452 | 0.605 | 13.636 | <0.001 |
Despite the potential positive role of vegetated road verges for biodiversity conservation, they are subject to periodic vegetation removal (by road companies), are linearly shaped, and are bordered by the road surface and, often unsuitable matrix habitat, thus providing challenging conditions for population establishment and persistence. This underlines the importance of fully understanding how road verges affect species of conservation concern, particularly its behavioral patterns such as space use and movements. Our results seem to support the first hypothesis (i), that individuals occupying road verges have smaller home ranges with lower shape complexity. As for movement patterns, the model results did not support the hypotheses that individuals living in the road verge have shorter paths (hypothesis ii), and more linear paths (hypothesis iii). These results suggest that movement behaviour is little affected by the degree of habitat reduction. However, there was an interaction effect between habitat patch and day period for path length, which partially supports the hypothesis that individual movements during high traffic periods (daytime and sunset) are more constrained in smaller habitat patches adjacent to the road (hypothesis iv). Road crossing results do not support the hypothesis that individuals living in smaller habitat patches cross the road more frequently than those in larger patches (hypothesis iv), although it suggests the existence of a strong road-barrier effect for individuals living in road verges.
As predicted, individuals occupying the Verge patch showed smaller home ranges with lower shape complexity than those in the larger area (Meadow patch). However, there were no significant differences in core areas, number of core areas and female overlap, as observed in previous studies with other vole species testing social organization over time and space (e.g.
The path length was similar among both patches. However, there was an interaction between the day period and the habitat patch. This interaction points to longer paths in the period of 5–9h (sunrise) in the Verge patch when compared with the 9–21h period. This has not happened in the Meadow patch. Since traffic intensity is higher during the day (and sunset), animals in Verge patch may have decreased their path length in response to increased traffic as was observed by
Due to their poor ability to move further away from the road, voles seem to have adapted their movement patterns to accommodate the exposure to the road disturbance. While animals in the Meadow patch showed no significant differences in movement patterns throughout the daily cycle (beyond what would be expected in diurnal animals), in the Verge patch, movement patterns may have changed or even been hindered during at least part of the day. Traffic disturbance could be the reason for the disparity of results between habitat patches, as the changes in the movement patterns coincided with the period of increased traffic (day and sunset periods). This agrees with observations for moose (Alces alces), which remain further away from roads during high traffic periods (
When analyzed at the patch scale, there were significant differences between observed and random paths in both patches. Although results indicates that the voles from both habitat patches avoided the road, this avoidance signal was 5 times stronger in the Verge patch. This explains why most animals from the Meadow patch showed individually non-significant differences in crossing estimates. Thus, the disparity between crossing estimates by animals in the different patches may be explained by the spatial location of home ranges in Meadow patch being further away from the road than in Verge patch. As individuals in Verge patch are restricted to a smaller area, it is more likely that any expected path would cross the road, whereas in Meadow patch, by being further away from the road, this is less likely. This could suggest that voles in Verge patch are more exposed to the barrier effect and thus more prone to local extinction events (
Overall, the present study is in accordance with other studies (e.g. McDonald and St. Clair 2004;
This study suggests that, although road verges can have several potential advantages for Cabrera voles, the small habitat patches typical of verges may restrict vole space use and movement patterns, and even act as a behavioural barrier to vole road crossings. Despite the extensive number of studies about the effect of roads on small mammals, few have focused on the behavioural traits related to individual space use and movement of an endangered species that often occur on road verges, such as the Cabrera vole. Due to the “Vulnerable” status of this species, the present study should be particularly relevant in terms of conservation. The results point to the importance of promoting wide and unrestricted verges for the species conservation. In the present case, it is possible that road crossing structures, such as small culverts, could soften the road-barrier effect, especially in the Verge patch.
Prof. Joana Reis from Veterinary Hospital of Évora University (HVUE) gave invaluable support in anesthetizing and handling of the captured voles. We thank Carmo Silva, Sofia Eufrázio, Vânia Salgueiro and Tiago Mendes for helping with captures and telemetry. This study was supported by the projects POPCONNECT (PTDC/AAG-MAA/0372/2014) and LIFE LINES (LIFE14 NAT/PT/001081).
The effect of habitat encroachment by roads on space use and movement patterns of an endangered vole
Data type: Docx file.
Explanation note: Details of predictors analysed and detailed tests and model results.